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+ | **Journal Publications** | ||
+ | - Scalable Unsupervised ML: Latency Hiding in Distributed Sparse Tensor Decomposition, | ||
+ | - Partitioning and Reordering for Spike-Based Distributed-Memory Parallel Gauss--Seidel, | ||
+ | - True Load Balancing for Matricized Tensor Times Khatri-Rao Product, //Nabil Abubaker, Seher Acer, Cevdet Aykanat//, **IEEE Transactions on Parallel and Distributed Systems**, vol. 32, no. 8, pp. 1974-1986, 2021. ({{tpds-tensorlb.pdf|Paper}}) | ||
+ | - Fast Shared-Memory Streaming Multilevel Graph Partitioning, | ||
+ | - Partitioning Models for General Medium-Grain Parallel Sparse Tensor Decomposition, | ||
+ | - Cartesian Partitioning Models for 2D and 3D Parallel SpGEMM Algorithms, //Gunduz V. Demirci and Cevdet Aykanat//, **IEEE Transactions on Parallel and Distributed Systems**, vol. 31, no. 12, pp. 2763-2775, 2020. ({{: | ||
+ | - Reordering sparse matrices into block-diagonal column-overlapped form, //Seher Acer and Cevdet Aykanat//, **Journal of Parallel and Distributed Computing**, | ||
+ | - Reduce Operations: Send Volume Balancing While Minimizing Latency, //M. Ozan Karsavuran, Seher Acer, Cevdet Aykanat//, **IEEE Transactions on Parallel and Distributed Systems**, vol. 31, no. 6, pp. 1461-1473, 2020. ({{tpds-reduce-2020.pdf|Paper}}) | ||
+ | - Regularizing irregularly sparse point-to-point communications, | ||
+ | - A Hypergraph Partitioning Model for Profile Minimization, | ||
+ | - Locality-aware and load-balanced static task scheduling for MapReduce, // Oguz Selvitopi, Gunduz V. Demirci, Ata Turk, Cevdet Aykanat//, **Future Generation Computer Systems**, vol. 90, pp. 49-61, 2019. ({{: | ||
+ | - Scaling Sparse Matrix-Matrix Multiplication in the Accumulo Database, // Gunduz V. Demirci, Cevdet Aykanat//, **Distributed and Parallel Databases**, | ||
+ | - Spatiotemporal Graph and Hypergraph Partitioning Models for Sparse Matrix-Vector Multiplication on Many-Core Architectures, | ||
+ | - A novel partitioning method for accelerating the block cimmino algorithm, // F. Sukru Torun, Murat Manguoglu, Cevdet Aykanat//, **SIAM Journal on Scientific Computing**, | ||
+ | - Cascade-aware partitioning of large graph databases, // Gunduz V. Demirci, Hakan Ferhatosmanoglu, | ||
+ | - Optimizing nonzero-based sparse matrix partitioning models via reducing latency, // Seher Acer, Oguz Selvitopi, Cevdet Aykanat//, **Journal of Parallel and Distributed Computing**, | ||
+ | - Improving medium-grain partitioning for scalable sparse tensor decomposition, | ||
+ | - 1.5 D parallel sparse matrix-vector multiply, // Enver Kayaaslan, Cevdet Aykanat, Bora Ucar//, **SIAM Journal on Scientific Computing**, | ||
+ | - Partitioning models for scaling parallel sparse matrix-matrix multiplication, | ||
+ | - Exploiting Locality in Sparse Matrix-Matrix Multiplication on Many-Core Architectures, | ||
+ | - A machine learning approach for result caching in web search engines, // Tayfun Kucukyilmaz, | ||
+ | - Parallel Minimum Norm Solution of Sparse Block Diagonal Column Overlapped Underdetermined Systems, // F. Sukru Torun, Murat Manguoglu and Cevdet Aykanat//, **ACM Transactions on Mathematical Software (TOMS)**, vol. 43, no. 4, pp. 31, 2017. ({{: | ||
+ | - A Recursive Hypergraph Bipartitioning Framework for Reducing Bandwidth and Latency Costs Simultaneously, | ||
+ | - Improving performance of sparse matrix dense matrix multiplication on large-scale parallel systems, // Seher Acer, Oguz Selvitopi and Cevdet Aykanat//, **Parallel Computing**, | ||
+ | - Reducing latency cost in 2D sparse matrix partitioning models, // R. Oguz Selvitopi and Cevdet Aykanat//, **Parallel Computing**, | ||
+ | - Locality-Aware Parallel Sparse Matrix-Vector and Matrix-Transpose-Vector Multiplication on Many-Core Processors, // M. Ozan Karsavuran, Kadir Akbudak and Cevdet Aykanat//, **IEEE Transactions on Parallel and Distributed Systems**, vol. 27, no. 6, pp. 1713--1726, 2016. ({{: | ||
+ | - A Novel Method for Scaling Iterative Solvers: Avoiding Latency Overhead of Parallel Sparse-Matrix Vector Multiplies, // R. Oguz Selvitopi, M. Mustafa Ozdal, Cevdet Aykanat//, **IEEE Transactions on Parallel and Distributed Systems**, vol. 26, no. 3, pp. 632--645, 2015. ({{: | ||
+ | - Simultaneous Input and Output Matrix Partitioning for Outer-Product-Parallel Sparse Matrix-Matrix Multiplication, | ||
+ | - Temporal Workload-Aware Replicated Partitioning for Social Networks, // Ata Turk, R. Oguz Selvitopi, Hakan Ferhatosmanoglu and Cevdet Aykanat//, **IEEE Transactions on Knowledge and Data Engineering**, | ||
+ | - Improving the Performance of Independent Task Assignment Heuristics MinMin, MaxMin and Sufferage, // E. Kartal Tabak, B. Barla Cambazoglu, Cevdet Aykanat//, **IEEE Transactions on Parallel and Distributed Systems**, vol. 25, no. 5, pp. 1244–1256, | ||
+ | - Constrained Min-Cut Replication for K-Way Hypergraph Partitioning, | ||
+ | - A term-based inverted index partitioning model for efficient distributed query processing, // B. Barla Cambazoglu, Enver Kayaaslan, Simon Jonassen, Cevdet Aykanat//, **ACM Transactions on the Web (TWEB)**, vol. 7, no. 3, 2014. ({{: | ||
+ | - Hypergraph Partitioning Based Models and Methods for Exploiting Cache Locality in Sparse Matrix-Vector Multiplication, | ||
+ | - Query-Log Aware Replicated Declustering, | ||
+ | - A Recursive Bipartitioning Algorithm for Permuting Sparse Square Matrices into Block Diagonal Form with Overlap, // Seher Acer, Enver Kayaaslan, Cevdet Aykanat//, **SIAM Journal on Scientific Computing**, | ||
+ | - Document replication strategies for geographically distributed web search engines, // Enver Kayaaslan, Berkant Barla Cambazoglu, Cevdet Aykanat//, **Information Processing & Management**, | ||
+ | - Active node determination for correlated data gathering in wireless sensor networks, // Efe Karasabun, Ibrahim Korpeoglu, Cevdet Aykanat//, **Computer Networks**, vol. 57, no. 5, pp. 1124--1138, 2013. ([[http:// | ||
+ | - A Signal Transduction Score Flow Algorithm for Cyclic Cellular Pathway Analysis, which Combines Transcriptome and ChIP-seq Data, // Zerrin Isik, Tulin Ersahin, Volkan Atalay, Cevdet Aykanat, and Rengul Cetin-Atalay//, | ||
+ | - Replicated partitioning for undirected hypergraphs, | ||
+ | - Partitioning Hypergraphs in Scientific Computing Applications through Vertex Separators on Graphs, // Enver Kayaaslan, Ali Pinar, Umit V. Catalyurek and Cevdet Aykanat//, **SIAM Journal on Scientific Computing**, | ||
+ | - A Parallel Framework for In-Memory Construction of Term-Partitioned Inverted Indexes, // Tayfun Kucukyilmaz, | ||
+ | - Multilevel Segmentation of Histopathological Images Using Cooccurrence of Tissue Objects, // Ahmet C. Simsek, Akif B. Tosun, Cevdet Aykanat, Cenk Sokmensuer, Cigdem Gunduz Demir//, **IEEE Transactions on Biomedical Engineering, | ||
+ | - Energy-price-driven query processing in multi-center web search engines, // Enver Kayaaslan, Barla B. Cambazoglu, Roi Blanco, Flavio P. Junqueira, Cevdet Aykanat//, **SIGIR' | ||
+ | - Query forwarding in geographically distributed search engines, // Barla B. Cambazoglu, Emre Varol, Enver Kayaaslan, Cevdet Aykanat, Ricardo Baeza-Yates//, | ||
+ | - Hypergraph Partitioning-Based Fill-Reducing Ordering for Symmetric Matrices, // Umit V. Çatalyürek, | ||
+ | - Parallel Frequent Itemset Mining with Selective Item Replication, | ||
+ | - On Two-Dimensional Sparse-Matrix Partitioning: | ||
+ | - A matrix partitioning interface to PaToH in MATLAB, // Umit .V. Çatalyürek, | ||
+ | - Site-Based Partitioning and Repartitioning Techniques for Parallel PageRank Computation, | ||
+ | - Efficient successor retrieval operations for aggregate query processing on clustered road networks, // Engin Demir, and Cevdet Aykanat//, **Information Sciences,** vol. 180, no. 14, pp. 2743--2762, 2010. ([[http:// | ||
+ | - A Link-Based Storage Scheme for Efficient Aggregate Query Processing on Clustered Road Networks, // Engin Demir, Cevdet Aykanat and Berkant B. Cambazoglu//, | ||
+ | - Selective Replicated Declustering for Arbitrary Queries, // Kerim Y. Oktay, Ata Turk, and Cevdet Aykanat//, **Lecture Notes in Computer Science**, vol. 5704, pp. 375--386, 2009. ([[http:// | ||
+ | - Multi-level Direct K-way Hypergraph Partitioning with Multiple Constraints and Fixed vertices, // Cevdet Aykanat, Berkant B. Cambazoglu and Bora Ucar//, **Journal of Parallel and Distributed Computing, | ||
+ | - Chat Mining: Predicting User and Message Attributes in Computer-Mediated Communication , // Tayfun Kucukyilmaz, | ||
+ | - One-Dimensional Partitioning for Heterogeneous Systems: Theory and Practice, // Ali Pinar, Ertugrul K. Tabak and Cevdet Aykanat//, **Journal of Parallel and Distributed Computing**, | ||
+ | - Clustering Spatial Networks for Aggregate Query Processing, a Hypergarph Approach, // Engin Demir, Cevdet Aykanat and Berkant B. Cambazoglu//, | ||
+ | - Revisiting Hypergraph Models for Sparse Matrix Partitioning, | ||
+ | - Partitioning Sparse Matrices for Parallel Preconditioned Iterative Methods, // Bora Ucar and Cevdet Aykanat//, **SIAM Journal on Scientific Computing, | ||
+ | - Hypergraph-Partitioning-Based Remapping Models for Image-Space-Parallel Direct Volume Rendering of Unstructured Grids, // B. Barla Cambazoglu and Cevdet Aykanat//, **IEEE Transactions on Parallel and Distributed Systems,** vol. 18, no. 1, pp.3--16, 2007. | ||
+ | - Heuristics for Scheduling File-Sharing Tasks on Heterogeneous Systems with Distributed Repositories, | ||
+ | - Architecture of a Grid-Enabled Search Engine, // Berkant B. Cambazoglu, Evren Karaca, Tayfun Kucukyilmaz, | ||
+ | - Parallel Image Restoration Using Surrogate Constraint Methods, // Bora Uçar, Cevdet Aykanat, Mustafa Pinar and Tahir Malas//, **Journal of Parallel and Distributed Computing, | ||
+ | - Adaptive Decomposition and Remapping Algorithms for Object-Space-Parallel Direct Volume Rendering of Unstructured Grids, // Cevdet Aykanat, B. Barla Cambazoglu, Ferit Findik and Tahsin Kurc//, **Journal of Parallel and Distributed Computing, | ||
+ | - Performance of Query Processing Implementations in Ranking-Based Text Retrieval Systems Using Inverted Indices, // B. Barla Cambazoglu and Cevdet Aykanat//, **Information Processing Management, | ||
+ | - Iterative-Improvement-Based Heuristics for Adaptive Scheduling of Tasks Sharing Files on Heterogeneous Master-Slave Environments, | ||
+ | - Task Assignment in Heterogeneous Systems, // Bora Ucar, Cevdet Aykanat, Kamer Kaya and Murat Ikinci//, **Journal of Parallel and Distributed Computing.** vol. 66, pp. 32-46, 2006. | ||
+ | - Effect of Inverted Partitioning Schemes on Performance of Query Processing in Parallel Text Retrieval Systems, // Berkant B. Cambazoglu and Cevdet Aykanat//, **Lecture Notes in Computer Science,** vol. 4263, pp. 717--725, 2006. | ||
+ | - Chat Mining for Gender Prediction, // Tayfun Kucukyilmaz, | ||
+ | - Iterative-Improvement-Based Declustering Heuristics for Multi-Disk Databases, // Mehmet Koyuturk and Cevdet Aykanat//, **Information Systems,** vol. 30, no. 9, pp. 47-70, 2005. | ||
+ | - Encapsulating Multiple Communication-Cost Metrics in Partitioning Sparse Rectangular Matrices for Matrix-Vector Multiplies, // Bora Ucar and Cevdet Aykanat//, **SIAM Journal on Scientific Computing, | ||
+ | - Permuting Sparse Rectangular Matrices into Block-Diagonal Form, // Cevdet Aykanat, Ali Pinar, and Umit V. Catalyurek//, | ||
+ | - Clustering Based on Data Patterns using Hypergraph Models, // Mustafa Ozdal and Cevdet Aykanat//, **Data Mining and Knowledge Discovery, | ||
+ | - A message Ordering Problem in Parallel Programs, // Bora Ucar and Cevdet Aykanat//, **Lecture Notes in Computer Science,** vol. 3241, pp. 131-138, 2004. | ||
+ | - Fast Optimal Load Balancing Algorithms for 1D Partitioning, | ||
+ | - Data-Parallel Web Crawling Models, // B. Barla Cambazoglu, Ata Turk, and Cevdet Aykanat//, **Lecture Notes in Computer Science,** vol. 3280, pp. 801-809, 2004. | ||
+ | - Direct Volume Rendering of Unstructured Grids, // Hakan Berk, Cevdet Aykanat, and Ugur Gudukbay//, **Computers & Graphics,** vol. 27, no. 9, pp. 387-406, 2003. | ||
+ | - Minimizing Communication Cost in Fine-Grain Partitioning of Sparse Matrices, // Bora Ucar and Cevdet Aykanat//, **Lecture Notes in Computer Science,** vol. 2869, pp. 926-933, 2003. | ||
+ | - Image-Space Parallel Direct Volume Rendering on a Cluster of PCs, // Berkant B. Cambazoglu and Cevdet Aykanat//, **Lecture Notes in Computer Science,** vol. 2869, pp. 457-464, 2003. | ||
+ | - Adaptive Routing on the New Switch Chip for IBM SP Systems, //Bulent Abali, Craig B. Stunkel, Jay Herring, Mohammed Banikazem, Dhabaleswar Panda, and Cevdet Aykanat//, **Journal of Parallel and Distributed Computing, | ||
+ | - Image-Space Decomposition Algorithms for Sort-First Parallel Volume Rendering of Unstructured Grids, // | ||
+ | - Hypergraph-Partitioning-Based Decomposition for Parallel Sparse-Matrix Vector Multiplication, | ||
+ | - A Fast Neural-Network Algorithm for VLSI Cell Placement, //Cevdet Aykanat, Tevfik Bultan, and Ismail Haritaoglu//, | ||
+ | - Object-Space Parallel Polygon Rendering on Hypercubes, //Tahsin M. Kurc, Cevdet Aykanat, and Bulent Ozguc//, **Computers & Graphics** , vol. 22, no. 4, pp. 487-503, 1998. | ||
+ | - Two Novel Multiway Circuit Partitioning Algorithms Using Relaxed Locking, // Ali Dasdan and Cevdet Aykanat//, **IEEE Transactions on Computer-Aided Design of Integrated Circuits and Systems,** vol. 16, no. 2, pp. 169-178, 1997. | ||
+ | - A Parallel Scaled Conjugate-Gradient Algorithm for the Solution Phase of Gathering Radiosity, // Tahsin M. Kurc, Cevdet Aykanat, and Bulent Ozguc//, **Visual Computer,** vol. 13, pp. 1-19, 1997. | ||
+ | - A Comparison of Spatial Subdivision Algorithms for Sort-First Rendering, // Tahsin M. Kurc, Cevdet Aykanat, and Bulent Ozguc//, **Lecture Notes in Computer Science,** vol. 1225, pp. 137-146, 1997. | ||
+ | - An Effective Model to Decompose Linear Programs for Parallel Solution, // Ali Pinar and Cevdet Aykanat//, **Lecture Notes in Computer Science,** vol. 1184, pp. 592-601, 1997. | ||
+ | - A Parallel Progressive Radiosity Algorithm Based on Patch Data Circulation, | ||
+ | - Decomposing Irregularly Sparse Matrices for Parallel Matrix-Vector Multiplication, | ||
+ | - Active Pixel Merging on Hypercube Multicomputers, | ||
+ | - Decomposing Linear Programs for Parallel Solution, // Ali Pinar, Umit V. Catalyurek, Cevdet Aykanat, and Mustafa C. Pinar//, **Lecture Notes in Computer Science,** vol. 1041, pp. 473-482, 1996. | ||
+ | - Efficient Fast Hartley Transform Algorithms for Hypercube-Connected Multicomputers, | ||
+ | - Algorithms for Efficient Vectorization of Repeated Sparse Power System Network Computations, | ||
+ | - Circuit Partitioning Using Mean Field Annealing, // Tevfik Bultan and Cevdet Aykanat//, **Neurocomputing, | ||
+ | - An Efficient Mean Field Annealing Formulation for Mapping Unstructured Domains to Hypercubes, // Cevdet Aykanat and Ismail Haritaoglu//, | ||
+ | - An Efficient Parallel Spatial Subdivision Algorithm for Object-Space Parallel Ray Tracing, // Cevdet Aykanat, Veysi Isler, and Bulent Ozguc//, **Computer-Aided Design,** vol. 26, no. 12, pp. 883-890, 1994. | ||
+ | - An Efficient Mapping Heuristic for Mesh-Connected Parallel Architectures Based on Mean Field Annealing, // Ismail Haritaoglu and Cevdet Aykanat//, **Lecture Notes in Computer Science,** vol. 854, pp. 820-831, 1994. | ||
+ | - Routing Algorithms for IBM SP1, // Bulent Abali and Cevdet Aykanat//, **Lecture Notes in Computer Science,** vol. 853, pp. 161-175, 1994. | ||
+ | - Efficient Overlapped FFT Algorithms for Hypercube-Connected Multicomputers, | ||
+ | - A Global Routing Heuristic for FPGAs Based on Mean Field Annealing, // Ismail Haritaoglu and Cevdet Aykanat//, **Lecture Notes in Computer Science,** vol. 849, pp. 45-56, 1994. | ||
+ | - MARS: A Tool Based Modeling, Animation and Parallel Rendering System, // Murat Aktihanoglu, | ||
+ | - A New Mapping Heuristic Based on Mean Field Annealing, // Tevfik Bultan and Cevdet Aykanat//, **Journal of Parallel and Distributed Computing, | ||
+ | - Spatial Domain Decomposition Applied to Linear Discontinuous SN Problems, // Musa Yavuz and Cevdet Aykanat//, **Transactions of American Nuclear Society,** vol. 66, pp. 274-275, 1992. | ||
+ | - A Fault-Tolerant Hexagonal Systolic Array, // Cevdet Aykanat and Fusun Ozguner//, **Information Processing Letters,** vol. 42, no. 4, pp. 187-196, 1992. ([[http:// | ||
+ | - Parallelization of Lee's Routing Algorithm on a Hypercube Multicomputer, | ||
+ | - Vectorization and Parallelization of Conjugate Gradient Algorithm on Hypercube-Connected Multiprocessors, | ||
+ | - A Reconfiguration Algorithm for Fault Tolerance in a Hypercube Multiprocessor, | ||
+ | - Iterative Algorithms for Solution of Large Sparse Systems of Linear Equations on Hypercubes, // Cevdet Aykanat, Fusun Ozguner, Fikret Ercal, and Ponnuswamy Sadayappan//, |